Optical Image Session (OIS) Data Types and Pipeline

Works with XNAT versions:

  • 1.6.5


Uploaded By:

Category: ,


  • Version: 1.0 (production)
  • License: Apache License 2.0
  • Upload Date: April 12, 2016

This Plugin Accesses:

  • Velocity/HTML Template
  • Database
  • Java Classes
  • Credits:

    John Flavin, Mike McKay
  • Description:

    Optical Imaging Session (OIS) data type and processing pipeline. This software was developed for the Joe Culver lab at Washington University for use in the fcMicrobiota project, which uses optical functional connectivity scans to study the effects of immature gut microbiome in mice. This package includes: the OIS data type module, the OIS pipeline module, and a python script for uploading OIS data to XNAT.

  • Environment where add-on is currently running:

    XNAT 1.65

Add-on Screenshots